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  5. Cre17.g739450

Cre17.g739450 (30782065, DRT1)


Aliases : 30782065, DRT1

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.NC2 regulator complex.beta component


Gene families : OG_01_0000661 (OrthoFinder) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g739450
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001542.23 tig00001542_g9330.t1 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder
Cz10g24060.t1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.03 OrthoFinder
OT_02G01380.1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.05 OrthoFinder
TP02G00300.1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.03 OrthoFinder
Vocar.0067s0020.1 32884140 Transcription factor CBF/NF-Y/archaeal histone domain... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 1 56
No external refs found!