Aliases : 30782509, RPP1
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP1 component
Gene families : OG_01_0003895 (OrthoFinder) Phylogenetic Tree(s): OG0003895_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre17.g738300 | |
Cluster | HCCA: Cluster_32 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000342.4 | tig00000342_g24192.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder | |
Cz04g14050.t1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.27 | OrthoFinder | |
Dusal.0143s00014.1 | 33194270 | 60s Acidic ribosomal protein [Interproscan]. | 0.16 | OrthoFinder | |
EOD08635 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.01 | OrthoFinder | |
OT_16G01900.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.05 | OrthoFinder | |
PTI_05G03770.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.32 | OrthoFinder | |
Sro608_g174750.1 | Contig3978.g30558 | 60s Acidic ribosomal protein [Interproscan]. | 0.43 | OrthoFinder | |
TP09G01390.1 | No alias | 60s Acidic ribosomal protein [Interproscan]. | 0.06 | OrthoFinder | |
Vocar.0009s0346.1 | 32893436 | 60s Acidic ribosomal protein [Interproscan]. | 0.24 | OrthoFinder | |
lcl|LHPG02000002.1_cds_PRW60291.1_4729 | PRW60291 | Regulator of chromosome condensation RCC1 | 0.01 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8495017.1_3547 | KAA8495017 | 60S acidic ribosomal protein P1 | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005739 | mitochondrion | IEP | Enrichment |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Enrichment |
CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0019866 | organelle inner membrane | IEP | Enrichment |
CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
CC | GO:0045275 | respiratory chain complex III | IEP | Enrichment |
CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Enrichment |
CC | GO:0098803 | respiratory chain complex | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
No external refs found! |