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  5. Cre17.g734644

Cre17.g734644 (30782285)


Aliases : 30782285

Description : Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene epoxidase


Gene families : OG_01_0000600 (OrthoFinder) Phylogenetic Tree(s): OG0000600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g734644
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.7 tig00000711_g3368.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder
Cz02g06030.t1 No alias Squalene epoxidase [Interproscan]. 0.03 OrthoFinder
OT_08G03190.1 No alias Squalene epoxidase [Interproscan]. 0.01 OrthoFinder
Vocar.0012s0134.1 32894825 Squalene epoxidase; NAD(P)-binding Rossmann-like domain... 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45481.1_1608 PRW45481 Arginine-tRNA chloroplastic mitochondrial-like isoform... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013698 Squalene_epoxidase 198 464
No external refs found!