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  5. Cre17.g728250

Cre17.g728250 (30782292)


Aliases : 30782292

No description available


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g728250
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cz02g19210.t1 No alias VPS13, repeated coiled region; Vacuolar protein... 0.03 OrthoFinder
Cz02g20010.t1 No alias Vacuolar protein sorting-associated protein 62 [Interproscan]. 0.02 OrthoFinder
OT_03G05120.1 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0015079 potassium ion transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071805 potassium ion transmembrane transport IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR031642 VPS13_mid_rpt 753 1016
IPR026854 VPS13-like_N 2 99
IPR031646 VPS13_N2 166 457
No external refs found!