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  5. Cre17.g726650

Cre17.g726650 (30782816)


Aliases : 30782816

No description available


Gene families : OG_01_0003168 (OrthoFinder) Phylogenetic Tree(s): OG0003168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g726650
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
OT_04G04370.1 No alias Ribosome biogenesis protein Nop16 [Interproscan]. 0.03 OrthoFinder
PTI_01G08310.1 No alias Ribosome biogenesis protein Nop16 [Interproscan]. 0.01 OrthoFinder
Sro1032_g233580.1 Contig2177.g18186 Ribosome biogenesis protein Nop16 [Interproscan]. 0.05 OrthoFinder
Vocar.0001s1427.1 32884384 Ribosome biogenesis protein Nop16 [Interproscan]. 0.04 OrthoFinder
XM_002504021.1 MICPUN_60312, 60312 Ribosome biogenesis protein Nop16 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR019002 Ribosome_biogenesis_Nop16 81 168
No external refs found!