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Aliases : 30782685
No description available
Gene families : OG_01_0000397 (OrthoFinder) Phylogenetic Tree(s): OG0000397_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre17.g720750 | |
| Cluster | HCCA: Cluster_15 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz04g39180.t1 | No alias | Polymerase, nucleotidyl transferase domain;... | 0.02 | OrthoFinder | |
| Cz06g32020.t1 | No alias | Polymerase, nucleotidyl transferase domain;... | 0.03 | OrthoFinder | |
| Dusal.0269s00010.1 | 33186346 | Hypothetical protein | 0.03 | OrthoFinder | |
| OT_06G03170.1 | No alias | Polymerase, nucleotidyl transferase domain [Interproscan]. | 0.03 | OrthoFinder | |
| OT_07G01120.1 | No alias | PAP/25A-associated; Polymerase, nucleotidyl transferase... | 0.01 | OrthoFinder | |
| Transcript_contig_57056 | 57056 | Polymerase, nucleotidyl transferase domain [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0008s0132.1 | 32897309 | Hypothetical protein | 0.02 | OrthoFinder | |
| XM_002508038.1 | MICPUN_60459, 60459 | Polymerase, nucleotidyl transferase domain [Interproscan]. | 0.06 | OrthoFinder | |
| lcl|BLLF01000770.1_cds_GFH14814.1_9291 | HaLaN_10935, GFH14814 | Poly(A) polymerase | 0.02 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59743.1_6818 | PRW59743 | Non-canonical poly(A) RNA polymerase PAPD5 | 0.03 | OrthoFinder | |
| lcl|LHPG02000013.1_cds_PRW44364.1_2309 | PRW44364 | Poly(A) RNA polymerase 2 | 0.03 | OrthoFinder | |
| lcl|VRMN01000016.1_cds_KAA8491094.1_9851 | KAA8491094 | Non-canonical poly(A) RNA polymerase protein Trf4-1 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| No external refs found! |