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  5. Cre17.g705550

Cre17.g705550 (30782312)


Aliases : 30782312

Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC5 component


Gene families : OG_01_0004225 (OrthoFinder) Phylogenetic Tree(s): OG0004225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g705550
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021012.37 tig00021012_g17019.t1 RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder
Cz09g16120.t1 No alias THO complex, subunit 5 [Interproscan]. 0.08 OrthoFinder
EOD36033 No alias THO complex, subunit 5 [Interproscan]. 0.01 OrthoFinder
XM_003064675.1 MicpuC2_67823, 67823 THO complex, subunit 5 [Interproscan]. 0.02 OrthoFinder
XM_003064676.1 MicpuC2_67824, 67824 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58174.1_7588 PRW58174 THO complex subunit 5 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019163 THO_Thoc5 35 377
No external refs found!