Cpa|evm.model.tig00000057.66 (tig00000057_g89.t1)


Aliases : tig00000057_g89.t1

Description : ABC transporter A family member 2 OS=Arabidopsis thaliana


Gene families : OG_01_0000157 (OrthoFinder) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000057.66
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Cre14.g613950 30776402 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre14.g618400 30776085 Solute transport.primary active transport.ABC... 0.03 OrthoFinder
Cz06g19080.t1 No alias ABC transporter-like; ABC-2 family transporter protein... 0.02 OrthoFinder
Dusal.0282s00013.1 33199281 Hypothetical protein 0.03 OrthoFinder
PTI_18G02470.1 No alias ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Vocar.0024s0109.1 32890527 ABC transporter-like; ABC-2 family transporter protein... 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45739.1_1293 PRW45739 ATP-binding cassette superfamily 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR018946 PhoD-like_MPP 967 1123
IPR003439 ABC_transporter-like_ATP-bd 496 599
No external refs found!