- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 30782062, RPL27
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL27 component
Gene families : OG_01_0004223 (OrthoFinder) Phylogenetic Tree(s): OG0004223_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre17.g701650 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021275.23 | tig00021275_g19883.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.34 | OrthoFinder | |
| Cz04g09100.t1 | No alias | Ribosomal protein L27e [Interproscan]. | 0.35 | OrthoFinder | |
| Dusal.2138s00001.1 | 33185794 | Ribosomal protein L27e; KOW [Interproscan]. | 0.23 | OrthoFinder | |
| EOD36904 | No alias | Ribosomal protein L27e [Interproscan]. | 0.25 | OrthoFinder | |
| OT_05G00120.1 | No alias | KOW; Ribosomal protein L27e [Interproscan]. | 0.22 | OrthoFinder | |
| PTI_01G09850.1 | No alias | Ribosomal protein L27e; KOW [Interproscan]. | 0.45 | OrthoFinder | |
| Sro245_g097440.1 | Contig3087.g24615 | 60S ribosomal protein L27 | 0.5 | OrthoFinder | |
| SymbC1.scaffold7526.4 | 7526.4 | Ribosomal protein L27e [Interproscan]. | 0.05 | OrthoFinder | |
| TP15G01980.1 | No alias | Ribosomal protein L27e [Interproscan]. | 0.4 | OrthoFinder | |
| Vocar.0004s0217.1 | 32889937 | Ribosomal protein L27e; KOW [Interproscan]. | 0.16 | OrthoFinder | |
| XM_002504400.1 | MICPUN_107054, 107054 | Ribosomal protein L27e [Interproscan]. | 0.47 | OrthoFinder | |
| XM_003059887.1 | MicpuC2_34421, 34421 | Ribosomal protein L27e [Interproscan]. | 0.16 | OrthoFinder | |
| lcl|LHPG02000028.1_cds_PRW05844.1_6023 | PRW05844 | 60S ribosomal L27-3-like | 0.21 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8495086.1_3616 | KAA8495086 | 60S ribosomal protein L27-B | 0.38 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001141 | Ribosomal_L27e | 52 | 135 |
| No external refs found! |