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  5. Cre17.g697350

Cre17.g697350 (30782323)


Aliases : 30782323

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MOS4 component


Gene families : OG_01_0003885 (OrthoFinder) Phylogenetic Tree(s): OG0003885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g697350
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.22 tig00000217_g19155.t1 RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder
Cz03g32140.t1 No alias Pre-mRNA-splicing factor SPF27 [Interproscan]. 0.02 OrthoFinder
Dusal.0018s00018.1 33187059 Pre-mRNA-splicing factor SPF27 [Interproscan]. 0.03 OrthoFinder
XM_002499939.1 MICPUN_56308, 56308 Pre-mRNA-splicing factor SPF27 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44377.1_2333 PRW44377 Pre-mRNA-splicing factor SPF27-like protein isoform B 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR008409 SPF27 29 228
No external refs found!