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  5. Cre16.g692901

Cre16.g692901 (30778072)


Aliases : 30778072

Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC17 component


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g692901
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Dusal.0089s00003.1 33198328 CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.07 OrthoFinder
Dusal.1408s00001.1 33194890 CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.12 OrthoFinder
EOD05550 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.05 OrthoFinder
EOD27022 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder
EOD42073 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.05 OrthoFinder
SymbC1.scaffold1087.4 1087.4 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.01 OrthoFinder
SymbC1.scaffold8469.1 8469.1 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.01 OrthoFinder
Transcript_contig_90264 90264 CobW/HypB/UreG, nucleotide-binding domain [Interproscan]. 0.02 OrthoFinder
XM_003055476.1 MicpuC2_24257, 24257 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
InterPro domains Description Start Stop
IPR003495 CobW/HypB/UreG_dom 84 275
IPR011629 Cbl_biosynth_CobW-like_C 412 506
No external refs found!