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  5. Cpa|evm.model.tig00000459.51

Cpa|evm.model.tig00000459.51 (tig00000459_g1113.t1)


Aliases : tig00000459_g1113.t1

No description available


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000459.51
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000615.50 tig00000615_g2580.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020710.86 tig00020710_g13343.t1 No description available 0.03 OrthoFinder
Cre12.g483500 30792128 No description available 0.05 OrthoFinder
Cz02g19210.t1 No alias VPS13, repeated coiled region; Vacuolar protein... 0.02 OrthoFinder
Cz14g16120.t1 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
Dusal.0511s00002.1 33195055 Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
Dusal.0595s00012.1 33191197 Vacuolar protein sorting-associated protein 13,... 0.05 OrthoFinder
EOD25591 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
EOD38883 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
OT_03G05620.1 No alias Vacuolar protein sorting-associated protein 13,... 0.03 OrthoFinder
OT_15G01640.1 No alias Vacuolar protein sorting-associated protein 13, second... 0.03 OrthoFinder
Transcript_contig_53733 53733 Vacuolar protein sorting-associated protein 13,... 0.01 OrthoFinder
Vocar.0019s0264.1 32892799 Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
Vocar.0031s0042.1 32890189 VPS13, repeated coiled region; Vacuolar protein... 0.03 OrthoFinder
lcl|BLLF01000617.1_cds_GFH13477.1_7954 HaLaN_09370, GFH13477 Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
lcl|BLLF01000617.1_cds_GFH13478.1_7955 HaLaN_09371, GFH13478 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56584.1_9635 PRW56584 Vacuolar sorting-associated 13A isoform B 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44988.1_1843 PRW44988 Vacuolar sorting-associated 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 6 114
IPR031646 VPS13_N2 140 355
No external refs found!