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  5. Cre16.g682350

Cre16.g682350 (30777070)


Aliases : 30777070

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCb-type E3 ligase


Gene families : OG_01_0000507 (OrthoFinder) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g682350
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001128.17 tig00001128_g7183.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020556.44 tig00020556_g11013.t1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder
Dusal.0235s00013.1 33189630 IBR domain [Interproscan]. 0.01 OrthoFinder
EOD37526 No alias IBR domain [Interproscan]. 0.01 OrthoFinder
Sro1343_g264600.1 Contig3518.g27228 Probable E3 ubiquitin-protein ligase RNF217 0.03 OrthoFinder
Sro1484_g276460.1 Contig1775.g15702 Protein ligase RNF19B 0.01 OrthoFinder
Sro212_g088220.1 Contig3756.g28805 Potential E3 ubiquitin-protein ligase ariadne-2 0.01 OrthoFinder
Vocar.0024s0099.1 32890434 Zinc finger, C3HC4 RING-type; IBR domain [Interproscan]. 0.02 OrthoFinder
XM_002508933.1 MICPUN_87045, 87045 IBR domain [Interproscan]. 0.02 OrthoFinder
XM_003061734.1 MicpuC2_63049, 63049 IBR domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01007235.1_cds_GFH32845.1_27322 HaLaN_32132, GFH32845 RBR-type E3 ubiquitin transferase 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60234.1_4427 PRW60234 Putative E3 ubiquitin-ligase ARI2 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002867 IBR_dom 284 330
IPR002867 IBR_dom 203 267
No external refs found!