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  5. Cre16.g681578

Cre16.g681578 (30778263, APC8)


Aliases : 30778263, APC8

Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.arc lamp subcomplex.APC8 component


Gene families : OG_01_0002316 (OrthoFinder) Phylogenetic Tree(s): OG0002316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g681578
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Cz12g09100.t1 No alias TPR repeat; Tetratricopeptide repeat; Tetratricopeptide... 0.03 OrthoFinder
EOD29125 No alias Putative cell division cycle protein 23, CDC23 [Ensembl]. 0.02 OrthoFinder
OT_07G02580.1 No alias Tetratricopeptide repeat; Cdc23 [Interproscan]. 0.04 OrthoFinder
Sro40_g024680.1 Contig335.g4475 Cell division cycle 0.03 OrthoFinder
Transcript_contig_78359 78359 Tetratricopeptide repeat; Cdc23 [Interproscan]. 0.01 OrthoFinder
Vocar.0074s0005.1 32899260 Cdc23 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000368.1_cds_GFH11027.1_5504 HaLaN_06456, GFH11027 TPR_REGION domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005680 anaphase-promoting complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
CC GO:0015629 actin cytoskeleton IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR001440 TPR_1 413 444
IPR007192 APC8 21 151
No external refs found!