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  5. Cre16.g680678

Cre16.g680678 (30777267, TRZ2)


Aliases : 30777267, TRZ2

Description : RNA processing.ribonuclease activities.RNase Z endoribonuclease


Gene families : OG_01_0000593 (OrthoFinder) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g680678
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cz06g11030.t1 No alias Metallo-beta-lactamase [Interproscan]. 0.03 OrthoFinder
Cz13g15250.t1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_12G02510.1 No alias tRNase Z endonuclease; Metallo-beta-lactamase [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0798.1 32885954 tRNase Z endonuclease; Metallo-beta-lactamase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 2140 2220
IPR001279 Metallo-B-lactamas 1916 1988
No external refs found!