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Aliases : 30777561, RFC3
Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component
Gene families : OG_01_0002126 (OrthoFinder) Phylogenetic Tree(s): OG0002126_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre16.g679950 | |
| Cluster | HCCA: Cluster_47 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000704.48 | tig00000704_g3335.t1 | Cell cycle.interphase.DNA... | 0.07 | OrthoFinder | |
| Cz09g17270.t1 | No alias | DNA polymerase III, delta subunit [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0195s00008.1 | 33196562 | Rad17 P-loop domain [Interproscan]. | 0.03 | OrthoFinder | |
| EOD28604 | No alias | Putative clamp loading subunit replication factor C, 3 [Ensembl]. | 0.13 | OrthoFinder | |
| OT_05G00160.1 | No alias | DNA polymerase III, delta subunit [Interproscan]. | 0.12 | OrthoFinder | |
| PTI_02G05010.1 | No alias | Replication factor C, C-terminal; DNA polymerase III,... | 0.02 | OrthoFinder | |
| Sro142_g066280.1 | Contig226.g2677 | Factor C subunit 3 | 0.11 | OrthoFinder | |
| Transcript_contig_1759 | 1759 | DNA polymerase III, delta subunit [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0018s0128.1 | 32898522 | DNA polymerase III, delta subunit [Interproscan]. | 0.05 | OrthoFinder | |
| XM_002504091.1 | MICPUN_61038, 61038 | DNA polymerase III, delta subunit [Interproscan]. | 0.11 | OrthoFinder | |
| XM_003060179.1 | MicpuC2_18270, 18270 | DNA polymerase III, delta subunit [Interproscan]. | 0.1 | OrthoFinder | |
| lcl|BLLF01000192.1_cds_GFH08891.1_3368 | HaLaN_03931, GFH08891 | AAA domain-containing protein | 0.03 | OrthoFinder | |
| lcl|BLLF01002740.1_cds_GFH25171.1_19648 | HaLaN_23095, GFH25171 | DNA replication factor C complex subunit 3 | 0.1 | OrthoFinder | |
| lcl|BLLF01002740.1_cds_GFH25172.1_19649 | HaLaN_23096, GFH25172 | AAA domain-containing protein | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| CC | GO:0000808 | origin recognition complex | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Enrichment |
| MF | GO:0004146 | dihydrofolate reductase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006260 | DNA replication | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006310 | DNA recombination | IEP | Enrichment |
| BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Enrichment |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Enrichment |
| CC | GO:0042555 | MCM complex | IEP | Enrichment |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Enrichment |
| BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |