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  5. Cre16.g679450

Cre16.g679450 (30777816)


Aliases : 30777816

No description available


Gene families : OG_01_0003875 (OrthoFinder) Phylogenetic Tree(s): OG0003875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g679450
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001073.2 tig00001073_g6811.t1 No description available 0.01 OrthoFinder
Cz03g11200.t1 No alias rRNA-processing protein Fcf1/Utp23 [Interproscan]. 0.05 OrthoFinder
EOD06856 No alias rRNA-processing protein Fcf1/Utp23 [Interproscan]. 0.06 OrthoFinder
EOD39716 No alias rRNA-processing protein Fcf1/Utp23 [Interproscan]. 0.06 OrthoFinder
OT_06G02130.1 No alias rRNA-processing protein Fcf1/Utp23 [Interproscan]. 0.04 OrthoFinder
Sro1636_g287550.1 Contig3111.g24736 Processing protein FCF1 0.06 OrthoFinder
XM_002499722.1 MICPUN_78885, 78885 rRNA-processing protein Fcf1/Utp23 [Interproscan]. 0.04 OrthoFinder
XM_003062098.1 MicpuC2_44763, 44763 rRNA-processing protein Fcf1/Utp23 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58087.1_7664 PRW58087 RRNA-processing FCF1-like protein 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493265.1_9566 KAA8493265 RRNA-processing protein FCF1-like 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR006984 Fcf1/Utp23 85 181
No external refs found!