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  5. Cre16.g679250

Cre16.g679250 (30778123, ELI1)


Aliases : 30778123, ELI1

Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein


Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g679250
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cz07g29280.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz07g30110.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Cz08g00120.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.1 OrthoFinder
Cz14g24190.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.12 OrthoFinder
Cz17g16050.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.09 OrthoFinder
Dusal.0361s00001.1 33202645 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
OT_04G01820.1 No alias FAS1 domain; Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
OT_13G02960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Transcript_contig_55820 55820 Hypothetical protein 0.07 OrthoFinder
Transcript_contig_78826 78826 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0001s0155.1 32884709 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0006s0022.1 32894246 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
XM_002501471.1 MICPUN_108160, 108160 Early light induced protein-like with fasciclin domain,... 0.03 OrthoFinder
XM_002502811.1 MICPUN_104860, 104860 Early light induced protein-like 5, chloroplast... 0.02 OrthoFinder
XM_002505237.1 MICPUN_62633, 62633 Early light induced protein-like 3, chloroplast... 0.03 OrthoFinder
XM_002505734.1 MICPUN_96716, 96716 Early light induced protein-like 6, chloroplast... 0.02 OrthoFinder
XM_002506082.1 MICPUN_63993, 63993 Early light induced protein-like protein, chloroplast... 0.05 OrthoFinder
XM_003057940.1 MicpuC2_70823, 70823 Early light induced protein-like protein, with fasciclin... 0.04 OrthoFinder
XM_003063778.1 MicpuC2_48963, 48963 Early light induced protein-like 6, chloroplast... 0.02 OrthoFinder
lcl|BLLF01000380.1_cds_GFH11164.1_5641 HaLaN_06615, GFH11164 Chloroplast carotene biosynthesis related protein 0.05 OrthoFinder
lcl|BLLF01000628.1_cds_GFH13571.1_8048 HaLaN_09486, GFH13571 Carotene biosynthesis-related protein 0.06 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18033.1_12510 HaLaN_14768, GFH18033 Chloroplast carotene biosynthesis related protein 0.05 OrthoFinder
lcl|BLLF01001239.1_cds_GFH18034.1_12511 HaLaN_14769, GFH18034 Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01002554.1_cds_GFH24512.1_18989 HaLaN_22321, GFH24512 Desiccation stress protein DSP-22, chloroplastic 0.07 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60462.1_4167 PRW60462 Early light-inducible 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50936.1_979 PRW50936 Carotene biosynthesis-related CBR 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 73 164
No external refs found!