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  5. Cre16.g677382

Cre16.g677382 (30777694)


Aliases : 30777694

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g677382
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000448.26 tig00000448_g858.t1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder
Cpa|evm.model.tig00020780.48 tig00020780_g13797.t2 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder
Cpa|evm.model.tig00021038.78 tig00021038_g17567.t1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder
Cz14g00040.t1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
EOD39718 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
OT_13G00110.1 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
TP03G03200.1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_11331 11331 SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_55280 55280 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000133.1_cds_GFH08051.1_2528 HaLaN_02951, GFH08051 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000902.1_cds_GFH15798.1_10275 HaLaN_12098, GFH15798 Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497884.1_6837 KAA8497884 Myb-related protein B 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499442.1_8395 KAA8499442 Transcription factor MYB52 0.05 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495387.1_1385 KAA8495387 Myb-related protein A 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495402.1_1400 KAA8495402 Transcription factor MYB44 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494854.1_3384 KAA8494854 Transcription factor 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 89 132
IPR001005 SANT/Myb 37 83
No external refs found!