Cre16.g674350 (30777293, MRPS13)

Aliases : 30777293, MRPS13

No description available

Gene families : OG_01_0000909 (OrthoFinder) Phylogenetic Tree(s): OG0000909_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cre16.g674350
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cz12g20170.t1 No alias Ribosomal protein S13 [Interproscan]. 0.03 OrthoFinder
CzCPg00340.t1 No alias Ribosomal protein S11 [Interproscan]. 0.05 OrthoFinder
Sro51_chlor_g029670.1 Rps13 Rps13 0.05 OrthoFinder
Sro51_chlor_g029680.1 Rps11 Rps11 0.05 OrthoFinder
Sro884_mit_g215880.1 Rps13 Rps13 0.04 OrthoFinder
Vocar.0001s1401.1 32884372 Ribosomal protein S11 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002596.1_cds_GFH24655.1_19132 HaLaN_22490, GFH24655 Mitochondrial ribosomal protein S11 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006412 translation IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 8 107
No external refs found!