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Aliases : 30777782, RPS30
Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS30 component
Gene families : OG_01_0004587 (OrthoFinder) Phylogenetic Tree(s): OG0004587_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre16.g666301 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001003.33 | tig00001003_g6288.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.25 | OrthoFinder | |
| Cz03g18060.t1 | No alias | Ribosomal protein S30 [Interproscan]. | 0.03 | OrthoFinder | |
| EOD14554 | No alias | Ribosomal protein S30 [Interproscan]. | 0.05 | OrthoFinder | |
| EOD23777 | No alias | Ribosomal protein S30 [Interproscan]. | 0.05 | OrthoFinder | |
| OT_08G00570.1 | No alias | Ribosomal protein S30 [Interproscan]. | 0.1 | OrthoFinder | |
| PTI_04G04400.1 | No alias | Ribosomal protein S30 [Interproscan]. | 0.4 | OrthoFinder | |
| Sro1093_g240360.1 | Contig384.g5162 | 40S ribosomal protein S30 | 0.46 | OrthoFinder | |
| SymbC1.scaffold1197.1 | 1197.1 | Ribosomal protein S30 [Interproscan]. | 0.02 | OrthoFinder | |
| TP01G05720.1 | No alias | Ribosomal protein S30 [Interproscan]. | 0.11 | OrthoFinder | |
| Vocar.0066s0009.1 | 32891752 | Ribosomal protein S30 [Interproscan]. | 0.09 | OrthoFinder | |
| XM_002502986.1 | MICPUN_59642, 59642 | Ribosomal protein S30; Ribosomal protein S15 [Interproscan]. | 0.38 | OrthoFinder | |
| XM_003058671.1 | MicpuC2_57777, 57777 | Ribosomal protein | 0.14 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006846 | Ribosomal_S30 | 3 | 60 |
| No external refs found! |