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  5. Cre16.g665800

Cre16.g665800 (30777013, SSS4)


Aliases : 30777013, SSS4

Description : Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000642 (OrthoFinder) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre16.g665800
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020746.8 tig00020746_g13662.t1 Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 OrthoFinder
Cre16.g663850 30778255, SSS5 Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 OrthoFinder
Dusal.0276s00017.1 33203067 Carbohydrate binding module family 25; Starch synthase,... 0.03 OrthoFinder
Dusal.2049s00001.1 33192974 Carbohydrate binding module family 25 [Interproscan]. 0.03 OrthoFinder
Vocar.0001s0072.1 32885071 Glycosyl transferase, family 1; Starch synthase,... 0.03 OrthoFinder
Vocar.0002s0103.1 32891151 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder
Vocar.0041s0007.1 32888801 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder
XM_002500647.1 MICPUN_104780, 104780 Glycosyltransferase family 5 protein (SSIV) 0.03 OrthoFinder
XM_002506477.1 MICPUN_105006, 105006 Glycosyltransferase family 5 protein (SSIIIA) 0.03 OrthoFinder
XM_003058765.1 MicpuC2_33450, 33450 Glycosyltransferase family 5 protein (SSIIIA) 0.03 OrthoFinder
lcl|BLLF01000364.1_cds_GFH10986.1_5463 HaLaN_06402, GFH10986 Starch synthase, catalytic domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000636.1_cds_GFH13657.1_8134 HaLaN_09586, GFH13657 Starch synthase, catalytic domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005024.1_cds_GFH30614.1_25091 HaLaN_29499, GFH30614 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 149 392
IPR001296 Glyco_trans_1 459 616
No external refs found!