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  5. Cre16.g664550

Cre16.g664550 (30776923, SHMT1)


Aliases : 30776923, SHMT1

Description : Amino acid metabolism.biosynthesis.serine family.glycine.serine hydroxymethyltransferase


Gene families : OG_01_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g664550
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001130.31 tig00001130_g7262.t1 Enzyme classification.EC_2 transferases.EC_2.1... 0.01 OrthoFinder
Cpa|evm.model.tig00020903.25 tig00020903_g15092.t1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder
Cz03g20190.t1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.04 OrthoFinder
Dusal.0265s00004.1 33188542 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
EOD21370 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.04 OrthoFinder
OT_14G02690.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.06 OrthoFinder
OT_19G00180.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
PTI_01G07740.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.03 OrthoFinder
TP18G01090.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1378.1 32885069 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.03 OrthoFinder
Vocar.0041s0018.1 32888726 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.03 OrthoFinder
XM_003062377.1 MicpuC2_29249, 29249 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61055.1_24 PRW61055 Serine hydroxymethyltransferase 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 61 460
No external refs found!