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  5. Cre16.g663350

Cre16.g663350 (30776825)


Aliases : 30776825

Description : Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpX chaperone component


Gene families : OG_01_0001312 (OrthoFinder) Phylogenetic Tree(s): OG0001312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g663350
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cz03g23170.t1 No alias Clp ATPase, C-terminal; ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
Sro236_g094950.1 Contig1410.g12933 Protease ATP-binding subunit ClpX 0.01 OrthoFinder
Vocar.0041s0044.1 32888706 ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497431.1_1160 KAA8497431 ATP-dependent Clp protease ATP-binding subunit ClpX 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
CC GO:0000124 SAGA complex IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003713 transcription coactivator activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0070461 SAGA-type complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 466 536
IPR003959 ATPase_AAA_core 256 459
No external refs found!