1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g661450

Cre16.g661450 (30777754, HTV3)


Aliases : 30777754, HTV3

Description : Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.CENH3 histone H3 variant


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g661450
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264650 30779911, HTR27 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g265250 30779294 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre17.g709050 30782593, HTR3 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cz10g10220.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz13g04210.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0093s00026.1 33185350 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00033.1 33185318 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0165s00022.1 33193361 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0194s00024.1 33199901 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.0658s00002.1 33202429 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.1067s00005.1 33188990 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Dusal.1079s00002.1 33193518 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
EOD06916 No alias Putative histone H3 [Ensembl]. 0.02 OrthoFinder
EOD22942 No alias Putative histone H3 [Ensembl]. 0.02 OrthoFinder
EOD23663 No alias Putative histone H3 [Ensembl]. 0.02 OrthoFinder
EOD31711 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
EOD33509 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
OT_01G03920.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.04 OrthoFinder
OT_11G02230.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
PTI_06G03830.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
PTI_06G03900.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Sro2314_g322910.1 Contig3467.g26905 Histone H3 0.01 OrthoFinder
Sro69_g038380.1 Contig4677.g34747 Histone H3 0.01 OrthoFinder
Sro6_g005390.1 Contig175.g2044 Histone H3 0.03 OrthoFinder
Sro749_g196770.1 Contig2460.g20134 Histone H3 0.01 OrthoFinder
TP14G03390.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0042.1 32894081 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Vocar.0027s0149.1 32887227 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Vocar.0122s0001.1 32887588 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32911.1_3817 PRW32911 Histone H3 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 27 147
No external refs found!