1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g658450

Cre16.g658450 (30777563)


Aliases : 30777563

No description available


Gene families : OG_01_0000636 (OrthoFinder) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g658450
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.28 tig00020780_g13781.t1 No description available 0.03 OrthoFinder
Dusal.0829s00006.1 33203646 GTP binding domain; GTPase Der, C-terminal... 0.02 OrthoFinder
OT_11G02210.1 No alias GTPase Der, C-terminal KH-domain-like; GTP binding... 0.02 OrthoFinder
PTI_01G00520.1 No alias GTPase Der, C-terminal KH-domain-like; GTP binding... 0.02 OrthoFinder
PTI_16G00810.1 No alias GTPase Der, C-terminal KH-domain-like; GTP binding... 0.03 OrthoFinder
Sro699_g189460.1 Contig3762.g28859 GTPase Der 0.01 OrthoFinder
Sro9_g007110.1 Contig4120.g31479 GTPase Der 0.05 OrthoFinder
Transcript_contig_59772 59772 GTP binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_6724 6724 GTP binding domain [Interproscan]. 0.01 OrthoFinder
Vocar.0004s0048.1 32889762 GTPase Der, C-terminal KH-domain-like; GTP binding... 0.04 OrthoFinder
XM_002509200.1 MICPUN_98167, 98167 GTP binding domain; GTPase Der, C-terminal... 0.11 OrthoFinder
XM_003061465.1 MicpuC2_44721, 44721 GTPase Der, C-terminal KH-domain-like; GTP binding... 0.08 OrthoFinder
lcl|BLLF01000810.1_cds_GFH15132.1_9609 HaLaN_11302, GFH15132 GTP-binding protein 0.02 OrthoFinder
lcl|BLLF01000856.1_cds_GFH15484.1_9961 HaLaN_11720, GFH15484 GTPase Der, C-terminal KH-domain-like; GTP binding... 0.02 OrthoFinder
lcl|BLLF01001604.1_cds_GFH20263.1_14740 HaLaN_17354, GFH20263 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495072.1_3602 KAA8495072 GTPase Der 0.06 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491065.1_9822 KAA8491065 GTPase Der 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 4 119
IPR032859 KH_dom-like 177 259
No external refs found!