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  5. Cre16.g649900

Cre16.g649900 (30777869, HTR40)


Aliases : 30777869, HTR40

Description : Chromatin organisation.histones.H3-type histone


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g649900
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000970.26 tig00000970_g5845.t1 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g264650 30779911, HTR27 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g265000 30778874 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g265250 30779294 Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder
Cre06.g266650 30779741 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g267950 30779543, HTR10 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g268350 30778762, HTR9 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre06.g274000 30779747, HTR7 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g274101 30779608 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g274350 30778588, HTR29 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g274850 30778497 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g275750 30779137 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g276600 30779595 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre06.g276850 30778983, HTR24 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre12.g504650 30791932 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre12.g504800 30793536, HTR16 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre12.g505500 30793498, HTR17 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre12.g506300 30792290, HTR18 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre12.g506500 30792666, HTR35 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre13.g569950 30784075, HTR2 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre17.g708150 30782647, HTR36 Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder
Cre17.g708700 30782453, HTR20 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cre17.g709050 30782593, HTR3 Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder
Cz05g04150.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz07g08150.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz08g27160.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz10g10220.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz13g04210.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Cz18g11080.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0002s00025.1 33187952 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0073s00028.1 33194595 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00026.1 33185350 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0093s00033.1 33185318 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.0152s00002.1 33186216 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Dusal.0322s00002.1 33197807 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.1067s00005.1 33188990 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Dusal.1079s00002.1 33193518 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
EOD22942 No alias Putative histone H3 [Ensembl]. 0.02 OrthoFinder
EOD31711 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
EOD33509 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
EOD34125 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
OT_11G02230.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
PTI_06G03830.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
PTI_06G03900.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
Sro1642_g288060.1 Contig4503.g33764 Histone H3 0.02 OrthoFinder
Sro228_g092790.1 Contig1235.g11593 Histone H3 0.03 OrthoFinder
Sro2314_g322910.1 Contig3467.g26905 Histone H3 0.03 OrthoFinder
Sro69_g038380.1 Contig4677.g34747 Histone H3 0.02 OrthoFinder
Sro932_g221580.1 Contig2857.g22901 Histone H3 0.01 OrthoFinder
Vocar.0002s0595.1 32891186 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Vocar.0028s0150.1 32895676 Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
XM_003059175.1 MicpuC2_27286, 27286 Histone H2A/H2B/H3 [Interproscan]. 0.02 OrthoFinder
XM_003061708.1 MicpuC2_48289, 48289 Histone H3 0.02 OrthoFinder
lcl|BLLF01000167.1_cds_GFH08542.1_3019 HaLaN_03522, GFH08542 Histone domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57150.1_9065 PRW57150 Histone H3 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32880.1_3740 PRW32880 Histone H3 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495290.1_1288 KAA8495290 Histone H3 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495863.1_1861 KAA8495863 Histone H3 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 131
No external refs found!