Aliases : 30783681
Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM3 tRNA guanosine-methyltransferase
Gene families : OG_01_0002169 (OrthoFinder) Phylogenetic Tree(s): OG0002169_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre15.g637350 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cz15g02010.t1 | No alias | tRNA/rRNA methyltransferase, SpoU type [Interproscan]. | 0.02 | OrthoFinder | |
PTI_18G01890.1 | No alias | tRNA/rRNA methyltransferase, SpoU type [Interproscan]. | 0.03 | OrthoFinder | |
TP05G05910.1 | No alias | tRNA/rRNA methyltransferase, SpoU type [Interproscan]. | 0.02 | OrthoFinder | |
Vocar.0012s0033.1 | 32895038 | tRNA/rRNA methyltransferase, SpoU type [Interproscan]. | 0.01 | OrthoFinder | |
XM_003057879.1 | MicpuC2_57651, 57651 | RNA methyltransferase | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0006396 | RNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006400 | tRNA modification | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001537 | SpoU_MeTrfase | 236 | 379 |
No external refs found! |