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  5. Cre15.g636896

Cre15.g636896 (30783536)


Aliases : 30783536

Description : RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase


Gene families : OG_01_0001084 (OrthoFinder) Phylogenetic Tree(s): OG0001084_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre15.g636896
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cz19g07060.t1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.03 OrthoFinder
OT_08G03610.1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.05 OrthoFinder
OT_10G03360.1 No alias tRNA-dihydrouridine synthase [Interproscan]. 0.02 OrthoFinder
Sro1238_g255210.1 Contig4178.g31868 Dihydrouridine(20/20a) synthase 0.02 OrthoFinder
XM_002508206.1 MICPUN_84205, 84205 tRNA-dihydrouridine synthase [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEA Interproscan
MF GO:0017150 tRNA dihydrouridine synthase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001269 DUS_fam 441 537
IPR001269 DUS_fam 190 305
IPR001269 DUS_fam 16 136
No external refs found!