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  5. Cre14.g632950

Cre14.g632950 (30776512, NOT1)


Aliases : 30776512, NOT1

Description : RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component


Gene families : OG_01_0002549 (OrthoFinder) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g632950
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
EOD13355 No alias CCR4-NOT transcription complex subunit 1, HEAT repeat;... 0.01 OrthoFinder
Sro944_g222970.1 Contig4161.g31789 CCR4-NOT transcription complex subunit 1 0.01 OrthoFinder
XM_003057741.1 MicpuC2_47070, 47070 CCR4-Not complex, Not1 subunit, domain of unknown... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR024557 CCR4-Not_Not1su_DUF3819 1210 1350
IPR032193 CNOT1_TTP_bind 454 623
IPR007196 CCR4-Not_Not1_C 1919 2278
IPR032191 CNOT1_CAF1_bind 820 1039
IPR032194 CNOT1_HEAT 266 430
No external refs found!