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Aliases : 30776673, RPT1
Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT1 regulatory component
Gene families : OG_01_0003144 (OrthoFinder) Phylogenetic Tree(s): OG0003144_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre14.g625400 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021464.16 | tig00021464_g21722.t1 | Protein degradation.26S proteasome.regulatory... | 0.07 | OrthoFinder | |
| Cz07g22040.t1 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... | 0.11 | OrthoFinder | |
| Dusal.0663s00008.1 | 33186083 | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.04 | OrthoFinder | |
| EOD04825 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... | 0.13 | OrthoFinder | |
| OT_01G04990.1 | No alias | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.11 | OrthoFinder | |
| PTI_11G02160.1 | No alias | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.32 | OrthoFinder | |
| Sro196_g083650.1 | Contig3206.g25361 | Proteasome regulatory subunit 7 | 0.31 | OrthoFinder | |
| Transcript_contig_58823 | 58823 | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.02 | OrthoFinder | |
| Vocar.0022s0115.1 | 32891868 | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.07 | OrthoFinder | |
| XM_002507609.1 | MICPUN_51697, 51697 | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... | 0.03 | OrthoFinder | |
| lcl|BLLF01003031.1_cds_GFH26126.1_20603 | HaLaN_24224, GFH26126 | Regulatory particle triple-A ATPase subunit 1 | 0.05 | OrthoFinder | |
| lcl|LHPG02000008.1_cds_PRW56600.1_9471 | PRW56600 | 26S protease regulatory subunit 7 | 0.05 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8494535.1_3065 | KAA8494535 | 26S protease regulatory subunit 7B | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Enrichment |
| CC | GO:0000502 | proteasome complex | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003779 | actin binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0007010 | cytoskeleton organization | IEP | Enrichment |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| MF | GO:0019781 | NEDD8 activating enzyme activity | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| MF | GO:0030234 | enzyme regulator activity | IEP | Enrichment |
| MF | GO:0030695 | GTPase regulator activity | IEP | Enrichment |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| MF | GO:0098772 | molecular function regulator | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1905368 | peptidase complex | IEP | Enrichment |
| CC | GO:1905369 | endopeptidase complex | IEP | Enrichment |
| No external refs found! |