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  5. Cre14.g615950

Cre14.g615950 (30776520)


Aliases : 30776520

Description : ABC transporter F family member 3 OS=Arabidopsis thaliana


Gene families : OG_01_0000392 (OrthoFinder) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g615950
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cz03g12130.t1 No alias Chromo domain; ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Cz13g02110.t1 No alias Four helical bundle domain; ABC transporter-like [Interproscan]. 0.04 OrthoFinder
Dusal.0160s00022.1 33188332 ABC transporter-like; Four helical bundle domain [Interproscan]. 0.02 OrthoFinder
OT_02G04850.1 No alias ABC transporter-like [Interproscan]. 0.1 OrthoFinder
OT_15G00690.1 No alias Chromo domain; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
PTI_01G08900.1 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
PTI_05G03100.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_09G04380.1 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Sro1610_g285810.1 Contig4416.g33186 [NU+] prion formation protein 1 0.02 OrthoFinder
Sro4_g003470.1 Contig3815.g29265 EIF-2-alpha kinase activator GCN1 0.04 OrthoFinder
Sro672_g185120.1 Contig919.g9660 [NU+] prion formation protein 1 0.02 OrthoFinder
SymbC1.scaffold6101.1 6101.1 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold847.8 847.8 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
TP05G07430.1 No alias Hypothetical protein 0.03 OrthoFinder
Vocar.0024s0005.1 32890284 ABC transporter-like [Interproscan]. 0.04 OrthoFinder
Vocar.0025s0015.1 32898331 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
XM_002500099.1 MICPUN_55988, 55988 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_002504129.1 MICPUN_113371, 113371 ABC transporter 0.02 OrthoFinder
XM_003057747.1 MicpuC2_16010, 16010 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
XM_003061290.1 MicpuC2_35134, 35134 ABC transporter-like; Chromo domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000024.1_cds_GFH06140.1_617 HaLaN_00719, GFH06140 ABC transporter-like [Interproscan]. 0.07 OrthoFinder
lcl|BLLF01000351.1_cds_GFH10833.1_5310 HaLaN_06221, GFH10833 ABC transporter-like [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 780 1013
IPR003439 ABC_transporter-like_ATP-bd 533 666
No external refs found!