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  5. Cpa|evm.model.tig00000057.46

Cpa|evm.model.tig00000057.46 (tig00000057_g65.t1)


Aliases : tig00000057_g65.t1

Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase epsilon complex.Dpb4 non-catalytic component


Gene families : OG_01_0000661 (OrthoFinder) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000057.46
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cre07.g341800 30775065 Cell cycle.interphase.DNA replication.elongation.DNA... 0.08 OrthoFinder
Cz10g08040.t1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.03 OrthoFinder
EOD23620 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.06 OrthoFinder
EOD25995 No alias DNA polymerase epsilon catalytic subunit 3 [Ensembl]. 0.04 OrthoFinder
OT_07G03550.1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.07 OrthoFinder
Sro256_g100540.1 Contig3587.g27699 Polymerase epsilon subunit 3 0.02 OrthoFinder
XM_002503573.1 MICPUN_60106, 60106 Transcription factor CBF/NF-Y/archaeal histone domain... 0.05 OrthoFinder
lcl|BLLF01001052.1_cds_GFH16797.1_11274 HaLaN_13294, GFH16797 CBFD_NFYB_HMF domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0031144 proteasome localization IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 23 87
No external refs found!