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  5. Cre14.g611150

Cre14.g611150 (30776765)


Aliases : 30776765

Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-B component


Gene families : OG_01_0002828 (OrthoFinder) Phylogenetic Tree(s): OG0002828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g611150
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021463.4 tig00021463_g21613.t1 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.06 OrthoFinder
Dusal.0199s00010.1 33199104 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
EOD05876 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.01 OrthoFinder
OT_04G00610.1 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold245.21 245.21 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_78261 78261 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
Vocar.0050s0055.1 32892381 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.05 OrthoFinder
XM_003063787.1 MicpuC2_53542, 53542 LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496831.1_560 KAA8496831 Small nuclear ribonucleoprotein-associated protein B 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 8 81
No external refs found!