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  5. Cre14.g610950

Cre14.g610950 (30776567)


Aliases : 30776567

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-4 component


Gene families : OG_01_0003142 (OrthoFinder) Phylogenetic Tree(s): OG0003142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g610950
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.80 tig00020554_g10859.t1 Protein degradation.26S proteasome.20S core... 0.11 OrthoFinder
Cz06g24010.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.1 OrthoFinder
Dusal.0079s00002.1 33199425 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
EOD37794 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.16 OrthoFinder
OT_16G02470.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_05G01540.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.2 OrthoFinder
Sro236_g094920.1 Contig1410.g12930 Probable proteasome subunit beta type-4 0.26 OrthoFinder
TP09G01320.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.2 OrthoFinder
Transcript_contig_55472 55472 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
Vocar.0050s0047.1 32892328 Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
XM_002506281.1 MICPUN_64381, 64381 Proteasome, subunit alpha/beta [Interproscan]. 0.01 OrthoFinder
XM_002506282.1 MICPUN_109546, 109546 Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
XM_003063267.1 MicpuC2_44925, 44925 Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01000939.1_cds_GFH16061.1_10538 HaLaN_12409, GFH16061 Proteasome subunit beta 0.06 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60170.1_6207 PRW60170 Proteasome subunit beta type-2-A 0.08 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497141.1_870 KAA8497141 Proteasome subunit beta type-2-B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 5 181
No external refs found!