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  5. Cre14.g610663

Cre14.g610663 (30776194)


Aliases : 30776194

Description : Small RNA degrading nuclease 5 OS=Arabidopsis thaliana


Gene families : OG_01_0000840 (OrthoFinder) Phylogenetic Tree(s): OG0000840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g610663
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cz06g00230.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz06g00240.t1 No alias Hypothetical protein 0.03 OrthoFinder
Cz06g19230.t1 No alias Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.02 OrthoFinder
OT_06G01920.1 No alias Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.02 OrthoFinder
TP14G01780.1 No alias Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.01 OrthoFinder
XM_002507770.1 MICPUN_84415, 84415 Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002153.1_cds_GFH22916.1_17393 HaLaN_20449, GFH22916 Exonuclease domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!