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  5. Cre13.g588550

Cre13.g588550 (30783952)


Aliases : 30783952

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP1-group protein


Gene families : OG_01_0002825 (OrthoFinder) Phylogenetic Tree(s): OG0002825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g588550
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
XM_002508580.1 MICPUN_62208, 62208 Syntaxin, N-terminal domain; Target SNARE coiled-coil... 0.03 OrthoFinder
XM_003063870.1 MicpuC2_49758, 49758 Syntaxin, N-terminal domain; Target SNARE coiled-coil... 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61542.1_77 PRW61542 Qa-SNARE Sso1 PM-type 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 248 300
IPR006011 Syntaxin_N 42 247
No external refs found!