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  5. Cre13.g587050

Cre13.g587050 (30784599, ERF1)


Aliases : 30784599, ERF1

Description : Protein biosynthesis.translation termination.eRF1 peptide release factor


Gene families : OG_01_0002303 (OrthoFinder) Phylogenetic Tree(s): OG0002303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g587050
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Dusal.0670s00005.1 33198280 eRF1 domain 2; eRF1 domain 1/Pelota-like; eRF1 domain 3... 0.02 OrthoFinder
OT_05G02330.1 No alias eRF1 domain 2; eRF1 domain 3; eRF1 domain 1/Pelota-like... 0.02 OrthoFinder
Sro513_g157870.1 Contig214.g2549 Eukaryotic peptide chain release factor subunit 1 0.03 OrthoFinder
Sro513_g157910.1 Contig214.g2553 Eukaryotic peptide chain release factor subunit 1 0.01 OrthoFinder
TP04G03720.1 No alias eRF1 domain 2; eRF1 domain 1/Pelota-like; eRF1 domain 3... 0.02 OrthoFinder
Transcript_contig_55272 55272 eRF1 domain 2; eRF1 domain 3; eRF1 domain 1/Pelota-like... 0.01 OrthoFinder
lcl|BLLF01002302.1_cds_GFH23562.1_18039 HaLaN_21190, GFH23562 ERF1_1 domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR005140 eRF1_1_Pelota 17 138
IPR005141 eRF1_2 144 275
IPR005142 eRF1_3 279 416
No external refs found!