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  5. Cre13.g581450

Cre13.g581450 (30784003, RPN7)


Aliases : 30784003, RPN7

Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component


Gene families : OG_01_0003515 (OrthoFinder) Phylogenetic Tree(s): OG0003515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g581450
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000615.75 tig00000615_g2605.t1 Protein degradation.26S proteasome.regulatory... 0.16 OrthoFinder
Cz08g26110.t1 No alias 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.16 OrthoFinder
Dusal.0179s00019.1 33190129 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.02 OrthoFinder
EOD23564 No alias 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.11 OrthoFinder
EOD33243 No alias 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.09 OrthoFinder
OT_09G02120.1 No alias Proteasome component (PCI) domain; 26S proteasome... 0.07 OrthoFinder
PTI_02G06010.1 No alias 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.28 OrthoFinder
Sro2134_g315960.1 Contig2353.g19341 ATPase regulatory subunit 6 0.35 OrthoFinder
TP05G01650.1 No alias Proteasome component (PCI) domain; 26S proteasome... 0.2 OrthoFinder
Transcript_contig_89237 89237 Proteasome component (PCI) domain; 26S proteasome... 0.05 OrthoFinder
Vocar.0001s0077.1 32885006 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.03 OrthoFinder
XM_002508764.1 MICPUN_109050, 109050 Proteasome component (PCI) domain; 26S proteasome... 0.13 OrthoFinder
XM_003056762.1 MicpuC2_44063, 44063 26S proteasome regulatory subunit Rpn7/COP9 signalosome... 0.07 OrthoFinder
lcl|BLLF01001077.1_cds_GFH16965.1_11442 HaLaN_13491, GFH16965 PCI domain-containing protein 0.07 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60726.1_4407 PRW60726 26S proteasome non-ATPase regulatory subunit 6-like protein 0.08 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496364.1_93 KAA8496364 26S proteasome non-ATPase regulatory subunit 6-like 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019781 NEDD8 activating enzyme activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR019585 Rpn7/CSN1 61 233
IPR000717 PCI_dom 253 352
No external refs found!