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  5. Cre13.g578100

Cre13.g578100 (30784397)


Aliases : 30784397

No description available


Gene families : OG_01_0004564 (OrthoFinder) Phylogenetic Tree(s): OG0004564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g578100
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000880.31 tig00000880_g5191.t1 No description available 0.01 OrthoFinder
Cz08g21070.t1 No alias Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.08 OrthoFinder
Dusal.0102s00015.1 33190557 Hypothetical protein 0.02 OrthoFinder
Dusal.0102s00017.1 33190551 Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.04 OrthoFinder
OT_06G03060.1 No alias Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55118 55118 Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0173.1 32884314 Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.05 OrthoFinder
XM_002500239.1 MICPUN_55721, 55721 Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.07 OrthoFinder
XM_003061862.1 MicpuC2_51607, 51607 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01001475.1_cds_GFH19509.1_13986 HaLaN_16464, GFH19509 Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56342.1_10347 PRW56342 Nuclear pore complex Nup205 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR021827 Nup186/Nup192/Nup205 487 927
IPR021827 Nup186/Nup192/Nup205 3 168
IPR021827 Nup186/Nup192/Nup205 1049 1799
No external refs found!