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  5. Cre13.g577950

Cre13.g577950 (30784116, VPS60)


Aliases : 30784116, VPS60

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS60 associated protein


Gene families : OG_01_0002541 (OrthoFinder) Phylogenetic Tree(s): OG0002541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g577950
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.8 tig00021432_g21199.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder
Cz08g08220.t1 No alias Snf7 family [Interproscan]. 0.04 OrthoFinder
Dusal.0095s00031.1 33190277 Snf7 family [Interproscan]. 0.06 OrthoFinder
PTI_03G03320.1 No alias Snf7 family [Interproscan]. 0.04 OrthoFinder
Sro752_g197130.1 Contig1730.g15437 Protein sorting-associated protein 60 0.04 OrthoFinder
XM_002501866.1 MICPUN_112661, 112661 Snf7 family [Interproscan]. 0.06 OrthoFinder
XM_003057578.1 MicpuC2_67120, 67120 Snf7 family [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005003.1_cds_GFH30585.1_25062 HaLaN_29467, GFH30585 Snf7 family [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498562.1_7515 KAA8498562 Charged multivesicular body protein 5 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 13 205
No external refs found!