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  5. Cre13.g576250

Cre13.g576250 (30784588)


Aliases : 30784588

Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC1/Tau95 component


Gene families : OG_01_0006431 (OrthoFinder) Phylogenetic Tree(s): OG0006431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g576250
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
OT_05G00440.1 No alias Transcription factor IIIC subunit 5, HTH domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78470 78470 Transcription factor IIIC subunit Tfc1/Sfc1, triple... 0.01 OrthoFinder
Vocar.0001s0148.1 32884834 Transcription factor IIIC subunit Tfc1/Sfc1, triple... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR019136 TF_IIIC_su-5_HTH 286 328
No external refs found!