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  5. Cre13.g571200

Cre13.g571200 (30784146)


Aliases : 30784146

Description : Probable histidine kinase 1 OS=Oryza sativa subsp. indica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre13.g571200
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.42 tig00021501_g21945.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00021348.102 tig00021348_g20609.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021348.103 tig00021348_g20609.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cre02.g074150 30785488, COP5 Histidine kinase 5 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre17.g733150 30781867 Histidine kinase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cz17g16020.t1 No alias Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Sro346_g122750.1 Contig4731.g35102 Hybrid signal transduction histidine kinase J 0.02 OrthoFinder
Transcript_contig_89432 89432 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
lcl|BLLF01000625.1_cds_GFH13551.1_8028 HaLaN_09455, GFH13551 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01000788.1_cds_GFH14960.1_9437 HaLaN_11104, GFH14960 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000788.1_cds_GFH14961.1_9438 HaLaN_11105, GFH14961 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|BLLF01003144.1_cds_GFH26484.1_20961 HaLaN_24642, GFH26484 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 1147 1311
IPR000014 PAS 377 469
IPR000014 PAS 904 1009
IPR003661 HisK_dim/P 1033 1098
IPR001789 Sig_transdc_resp-reg_receiver 2157 2270
No external refs found!