1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre13.g568900

Cre13.g568900 (30784330, RPL17)


Aliases : 30784330, RPL17

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL17 component


Gene families : OG_01_0003841 (OrthoFinder) Phylogenetic Tree(s): OG0003841_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g568900
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001215.8 tig00001215_g7572.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 OrthoFinder
Cz08g22070.t1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.48 OrthoFinder
Dusal.0117s00014.1 33191086 Ribosomal protein L22/L17 [Interproscan]. 0.2 OrthoFinder
EOD18576 No alias Ribosomal protein L22/L17 [Interproscan]. 0.06 OrthoFinder
OT_06G03040.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.28 OrthoFinder
PTI_15G02710.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.51 OrthoFinder
Sro490_g153560.1 Contig328.g4376 60S ribosomal protein L17 0.55 OrthoFinder
SymbC1.scaffold1979.3 1979.3 Ribosomal protein L22/L17 [Interproscan]. 0.09 OrthoFinder
TP03G04610.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.41 OrthoFinder
Vocar.0001s0273.1 32884978 Ribosomal protein L22/L17 [Interproscan]. 0.09 OrthoFinder
XM_002499746.1 MICPUN_93345, 93345 Ribosomal protein L22/L17 [Interproscan]. 0.21 OrthoFinder
XM_003062075.1 MicpuC2_49699, 49699 Ribosomal protein L22/L17 [Interproscan]. 0.14 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56515.1_9742 PRW56515 60S ribosomal L17-2 0.08 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499482.1_8435 KAA8499482 60S ribosomal protein L17 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 17 152
No external refs found!