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  5. Cre13.g568650

Cre13.g568650 (30784327, RPS3a)


Aliases : 30784327, RPS3a

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component


Gene families : OG_01_0002820 (OrthoFinder) Phylogenetic Tree(s): OG0002820_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre13.g568650
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.39 tig00020710_g13273.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 OrthoFinder
Cz10g21050.t1 No alias Ribosomal protein S3Ae [Interproscan]. 0.2 OrthoFinder
Dusal.0093s00008.1 33185336 Ribosomal protein S3Ae [Interproscan]. 0.16 OrthoFinder
EOD08172 No alias Ribosomal protein S3Ae [Interproscan]. 0.13 OrthoFinder
EOD18963 No alias Ribosomal protein S3Ae [Interproscan]. 0.18 OrthoFinder
OT_20G00130.1 No alias Ribosomal protein S3Ae [Interproscan]. 0.16 OrthoFinder
PTI_01G05430.1 No alias Ribosomal protein S3Ae [Interproscan]. 0.36 OrthoFinder
Sro174_g076500.1 Contig4298.g32434 40S ribosomal protein S1 0.32 OrthoFinder
Sro920_g220290.1 Contig2508.g20529 40S ribosomal protein S1 0.26 OrthoFinder
SymbC1.scaffold7952.3 7952.3 Ribosomal protein S3Ae [Interproscan]. 0.02 OrthoFinder
TP20G01320.1 No alias Ribosomal protein S3Ae [Interproscan]. 0.35 OrthoFinder
Vocar.0001s0280.1 32885113 Ribosomal protein S3Ae [Interproscan]. 0.03 OrthoFinder
XM_002505213.1 MICPUN_95475, 95475 Ribosomal protein S3Ae [Interproscan]. 0.27 OrthoFinder
XM_003060312.1 MicpuC2_49648, 49648 Ribosomal protein S3Ae [Interproscan]. 0.14 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39385.1_2562 PRW39385 40S ribosomal S3a-2 isoform A 0.13 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498213.1_7166 KAA8498213 40S ribosomal protein S3a 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!