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  5. Cre13.g567700

Cre13.g567700 (30783996)


Aliases : 30783996

Description : Chromatin organisation.histones.H2A-type histone


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g567700
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264750 30778682, HTA14 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g264950 30779952 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g266700 30779158 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g271350 30779391 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g273900 30779778 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g274200 30778751 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g275850 30779335 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre06.g276950 30778754, HTA24 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre12.g504500 30793209 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre12.g504750 30792225 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre12.g505550 30793129 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre12.g506250 30793152, HTA18 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre13.g570100 30784159, HTA2 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre13.g590800 30783997, HTA37 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder
Cre13.g591150 30784726, HTA38 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder
Cre17.g710400 30782701, HTA19 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre17.g711700 30781638, HTA5 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre17.g713400 30781819 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder
Cre17.g714500 30782017, HTA1 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder
Cz02g02050.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.05 OrthoFinder
Cz05g04180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Cz07g08180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Cz08g27130.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz18g11100.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Dusal.0093s00031.1 33185335 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.05 OrthoFinder
Dusal.0093s00037.1 33185342 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.05 OrthoFinder
Dusal.0152s00023.1 33186201 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Dusal.0165s00017.1 33193347 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Dusal.0322s00015.1 33197808 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0688s00003.1 33202688 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
EOD08304 No alias Putative histone H2A [Ensembl]. 0.06 OrthoFinder
EOD11019 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.01 OrthoFinder
EOD11956 No alias Putative histone H2A [Ensembl]. 0.03 OrthoFinder
EOD14007 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.01 OrthoFinder
EOD22956 No alias Putative histone H2A [Ensembl]. 0.04 OrthoFinder
EOD22963 No alias Putative histone H2A [Ensembl]. 0.04 OrthoFinder
OT_02G00110.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.04 OrthoFinder
OT_08G01910.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
OT_16G01100.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
PTI_06G01940.1 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.02 OrthoFinder
PTI_06G02110.1 No alias Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.03 OrthoFinder
Sro392_g133380.1 Contig4514.g33844 Histone H2A 0.04 OrthoFinder
Sro470_g149450.1 Contig850.g9339 Histone H2A 0.01 OrthoFinder
Vocar.0001s0459.1 32885662 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Vocar.0001s0880.1 32885856 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Vocar.0001s1633.1 32885235 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Vocar.0006s0196.1 32893915 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Vocar.0016s0271.1 32898098 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Vocar.0018s0027.1 32898733 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Vocar.0027s0147.1 32887249 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
XM_002504498.1 MICPUN_107416, 107416 Hypothetical protein (H2A) 0.02 OrthoFinder
XM_003054928.1 MicpuC2_12375, 12375 Histone H2A 0.03 OrthoFinder
XM_003058838.1 MicpuC2_17393, 17393 Histone H2A, C-terminal domain; Histone H2A/H2B/H3... 0.03 OrthoFinder
lcl|BLLF01002571.1_cds_GFH24563.1_19040 HaLaN_22382, GFH24563 Histone H2A 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32875.1_3737 PRW32875 Histone H2A 0.03 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492219.1_5402 KAA8492219 Histone H2A.V 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 23 106
IPR032454 Histone_H2A_C 107 138
No external refs found!