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  5. Cre12.g557400

Cre12.g557400 (30792904)


Aliases : 30792904

Description : DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).DNA repair protein (RAD4)


Gene families : OG_01_0003839 (OrthoFinder) Phylogenetic Tree(s): OG0003839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g557400
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Sro256_g100640.1 Contig3587.g27709 XP-C cells homolog 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR018328 Rad4_beta-hairpin_dom3 997 1071
IPR018325 Rad4/PNGase_transGLS-fold 508 591
IPR018327 BHD_2 872 990
IPR018326 Rad4_beta-hairpin_dom1 821 866
No external refs found!