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  5. Cre12.g556650

Cre12.g556650 (30792661, APC4)


Aliases : 30792661, APC4

Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component


Gene families : OG_01_0004948 (OrthoFinder) Phylogenetic Tree(s): OG0004948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g556650
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021612.50 tig00021612_g22890.t1 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.01 OrthoFinder
Cz06g07020.t1 No alias Anaphase-promoting complex subunit 4 long domain;... 0.03 OrthoFinder
OT_02G03210.1 No alias Anaphase-promoting complex subunit 4 long domain;... 0.03 OrthoFinder
Vocar.0001s1125.1 32885171 Anaphase-promoting complex subunit 4 long domain;... 0.03 OrthoFinder
XM_002502419.1 MICPUN_58493, 58493 Anaphase-promoting complex subunit 4 long domain;... 0.03 OrthoFinder
lcl|BLLF01002073.1_cds_GFH22584.1_17061 HaLaN_20068, GFH22584 Anaphase-promoting complex subunit 4, WD40 domain;... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497900.1_6853 KAA8497900 Anaphase-promoting complex subunit 4 long domain;... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 41 115
IPR024790 APC4_long_dom 341 529
No external refs found!