- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 30791750, RER1
Description : Protein RER1C OS=Arabidopsis thaliana
Gene families : OG_01_0002814 (OrthoFinder) Phylogenetic Tree(s): OG0002814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre12.g555350 | |
| Cluster | HCCA: Cluster_80 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020710.65 | tig00020710_g13316.t1 | Protein RER1C OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| EOD11551 | No alias | Retrieval of early ER protein Rer1 [Interproscan]. | 0.03 | OrthoFinder | |
| EOD36677 | No alias | Retrieval of early ER protein Rer1 [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003063570.1 | MicpuC2_49748, 49748 | Retention in endoplasmic reticulum 1-like protein (RER1) | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Enrichment |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
| CC | GO:0019866 | organelle inner membrane | IEP | Enrichment |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0031090 | organelle membrane | IEP | Enrichment |
| CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Enrichment |
| CC | GO:0033180 | proton-transporting V-type ATPase, V1 domain | IEP | Enrichment |
| BP | GO:0034220 | ion transmembrane transport | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| BP | GO:1902600 | proton transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004932 | Rer1 | 3 | 159 |
| No external refs found! |