1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre12.g551550

Cre12.g551550 (30792623)


Aliases : 30792623

No description available


Gene families : OG_01_0001142 (OrthoFinder) Phylogenetic Tree(s): OG0001142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g551550
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Cz07g18270.t1 No alias DNA helicase Pif1-like [Interproscan]. 0.05 OrthoFinder
EOD22903 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
Sro2846_g338410.1 Contig1601.g14536 Helicase PIF1 0.02 OrthoFinder
Transcript_contig_62265 62265 DNA helicase Pif1-like [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW56986.1_9285 PRW56986 DNA helicase ATP-dependent 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003840 DNA_helicase 1119 1165
IPR010285 DNA_helicase_pif1-like 723 833
IPR010285 DNA_helicase_pif1-like 489 684
IPR001878 Znf_CCHC 1352 1367
No external refs found!